Review



matlab function 'silhouette  (MathWorks Inc)


Bioz Verified Symbol MathWorks Inc is a verified supplier  
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
    • 90
      Buy from Supplier

    Structured Review

    MathWorks Inc matlab function 'silhouette
    a Surgery for recording l/vlPAG vgat calcium transients (top). Example l/vlPAG vgat traces (bottom). b Order of assays. c L/vlPAG vgat activity centered at eating onset (cricket assay n = 223 neurons; walnut assay n = 204 neurons). d Representation of behaviors in principal component space (PC) during cricket hunting (see example on left). Clustering quality was measured by <t>silhouette</t> score, which was higher than the chance level of zero (dotted red line) ( n = 4 mice; one-sample two-tailed t -test, t-statistic = 2.79, p = 0.059). e Same as d , but for walnut ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 14.37, p = 0.001). f Behaviors were decoded above chance (red dotted line) ( n = 4 mice; one-sample two-tailed t -test, cricket t-statistics: approach = 3.87, p = 0.031; eat = 5.59, p = 0.011; walnut t-statistics: approach = 4.75, p = 0.018, eat = 7.53, p = 0.005). g Cells co-registered across assays. h Mahalanobis distance between points from two clusters that display higher overlap (left panel with light and dark blue points) and two clusters that are well-separated (right panel with light and dark green points). i Mahalanobis distance between approach and eating clusters across the cricket and walnut assays in n-dimensions ( n = # of co-registered neurons). The distance between eating clusters across assays is smaller than the distance between approach clusters, indicating the representation of eating is more conserved than food approach (approach sample n = 527 time points, eat sample n = 1958 time points; two-tailed Wilcoxon rank-sum test, z-score = 22.88, p < 0.001). j Same as d , but for co-registered cells, showing conserved representation of behaviors across assays ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 4.22, p = 0.024). k The distance between individual points and cluster center is smaller in the eating cluster than the approach cluster, indicating the representation of eating is more conserved across assays (approach sample n = 1049 time points, eat sample n = 5492 time points; two-tailed Wilcoxon rank-sum two-tailed test, z-score = 10.35, p < 0.001). *** p < 0.001, ** p < 0.01, * p < 0.05, † p = 0.059. Data are presented as mean values +/- SEM. Source data are provided as a Source Data File.
    Matlab Function 'Silhouette, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/silhouette+matlab+function/pmc10920831-532-14-12
    Average 90 stars, based on 1 article reviews
    matlab function 'silhouette - by Bioz Stars, 2026-09
    90/100 stars

    Images

    1) Product Images from "Control of feeding by a bottom-up midbrain-subthalamic pathway"

    Article Title: Control of feeding by a bottom-up midbrain-subthalamic pathway

    Journal: Nature Communications

    doi: 10.1038/s41467-024-46430-5

    a Surgery for recording l/vlPAG vgat calcium transients (top). Example l/vlPAG vgat traces (bottom). b Order of assays. c L/vlPAG vgat activity centered at eating onset (cricket assay n = 223 neurons; walnut assay n = 204 neurons). d Representation of behaviors in principal component space (PC) during cricket hunting (see example on left). Clustering quality was measured by silhouette score, which was higher than the chance level of zero (dotted red line) ( n = 4 mice; one-sample two-tailed t -test, t-statistic = 2.79, p = 0.059). e Same as d , but for walnut ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 14.37, p = 0.001). f Behaviors were decoded above chance (red dotted line) ( n = 4 mice; one-sample two-tailed t -test, cricket t-statistics: approach = 3.87, p = 0.031; eat = 5.59, p = 0.011; walnut t-statistics: approach = 4.75, p = 0.018, eat = 7.53, p = 0.005). g Cells co-registered across assays. h Mahalanobis distance between points from two clusters that display higher overlap (left panel with light and dark blue points) and two clusters that are well-separated (right panel with light and dark green points). i Mahalanobis distance between approach and eating clusters across the cricket and walnut assays in n-dimensions ( n = # of co-registered neurons). The distance between eating clusters across assays is smaller than the distance between approach clusters, indicating the representation of eating is more conserved than food approach (approach sample n = 527 time points, eat sample n = 1958 time points; two-tailed Wilcoxon rank-sum test, z-score = 22.88, p < 0.001). j Same as d , but for co-registered cells, showing conserved representation of behaviors across assays ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 4.22, p = 0.024). k The distance between individual points and cluster center is smaller in the eating cluster than the approach cluster, indicating the representation of eating is more conserved across assays (approach sample n = 1049 time points, eat sample n = 5492 time points; two-tailed Wilcoxon rank-sum two-tailed test, z-score = 10.35, p < 0.001). *** p < 0.001, ** p < 0.01, * p < 0.05, † p = 0.059. Data are presented as mean values +/- SEM. Source data are provided as a Source Data File.
    Figure Legend Snippet: a Surgery for recording l/vlPAG vgat calcium transients (top). Example l/vlPAG vgat traces (bottom). b Order of assays. c L/vlPAG vgat activity centered at eating onset (cricket assay n = 223 neurons; walnut assay n = 204 neurons). d Representation of behaviors in principal component space (PC) during cricket hunting (see example on left). Clustering quality was measured by silhouette score, which was higher than the chance level of zero (dotted red line) ( n = 4 mice; one-sample two-tailed t -test, t-statistic = 2.79, p = 0.059). e Same as d , but for walnut ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 14.37, p = 0.001). f Behaviors were decoded above chance (red dotted line) ( n = 4 mice; one-sample two-tailed t -test, cricket t-statistics: approach = 3.87, p = 0.031; eat = 5.59, p = 0.011; walnut t-statistics: approach = 4.75, p = 0.018, eat = 7.53, p = 0.005). g Cells co-registered across assays. h Mahalanobis distance between points from two clusters that display higher overlap (left panel with light and dark blue points) and two clusters that are well-separated (right panel with light and dark green points). i Mahalanobis distance between approach and eating clusters across the cricket and walnut assays in n-dimensions ( n = # of co-registered neurons). The distance between eating clusters across assays is smaller than the distance between approach clusters, indicating the representation of eating is more conserved than food approach (approach sample n = 527 time points, eat sample n = 1958 time points; two-tailed Wilcoxon rank-sum test, z-score = 22.88, p < 0.001). j Same as d , but for co-registered cells, showing conserved representation of behaviors across assays ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 4.22, p = 0.024). k The distance between individual points and cluster center is smaller in the eating cluster than the approach cluster, indicating the representation of eating is more conserved across assays (approach sample n = 1049 time points, eat sample n = 5492 time points; two-tailed Wilcoxon rank-sum two-tailed test, z-score = 10.35, p < 0.001). *** p < 0.001, ** p < 0.01, * p < 0.05, † p = 0.059. Data are presented as mean values +/- SEM. Source data are provided as a Source Data File.

    Techniques Used: Activity Assay, Two Tailed Test

    Related Articles

    other:

    Article Title: Stronger responses to darks along the ventral pathway of the cat visual cortex.
    Article Snippet: This article has been accepted for publication and undergone full peer review but has not been through the copyediting, typesetting, pagination and proofreading process, which may lead to differences between this version and the Version of Record.. Please cite this article as doi: 10.1111/ejn.14297 This article is protected by copyright.. All rights reserved.

    Article Title: A new method for identification of protein (sub)families in a set of proteins based on hydropathy distribution in proteins.
    Article Snippet: Structural similarity among proteins is reflected in the distribution of hydropathicity along the amino acids in the protein sequence.. Similarities in the hydropathy distributions are obvious for homologous proteins within a protein family.. They also were observed for proteins with related structures, even when sequence similarities were undetectable.

    Article Title: Parameter tuning differentiates granule cell subtypes enriching transmission properties at the cerebellum input stage
    Article Snippet: To evaluate the clustering result, the silhouette Matlab function was used.

    Article Title: Taxonomy of Individual Variations in Aesthetic Responses to Fractal Patterns
    Article Snippet: For each identified cluster, the average silhouette values, representing how well each participant fits within the assigned cluster, were calculated with the silhouette MATLAB function and shown in Figure .

    Article Title: Parameter tuning differentiates granule cell subtypes enriching transmission properties at the cerebellum input stage
    Article Snippet: The “ silhouette ” Matlab function was used to evaluate the clustering result.

    Biomarker Discovery:

    Article Title: Pulvinar Modulates Contrast Responses in the Visual Cortex as a Function of Cortical Hierarchy
    Article Snippet: .. The validation of the clustering method was performed using the silhouette MATLAB (RRID:SCR_001622) function, which calculates an index (silhouette value) ranging from −1 to 1 where values indicate how similar a data point is from its respective group, with negative values indicating a probable misclassified data point. ..



    Similar Products

    matlab function 'silhouette  (MathWorks Inc)
    90
    MathWorks Inc matlab function 'silhouette
    a Surgery for recording l/vlPAG vgat calcium transients (top). Example l/vlPAG vgat traces (bottom). b Order of assays. c L/vlPAG vgat activity centered at eating onset (cricket assay n = 223 neurons; walnut assay n = 204 neurons). d Representation of behaviors in principal component space (PC) during cricket hunting (see example on left). Clustering quality was measured by <t>silhouette</t> score, which was higher than the chance level of zero (dotted red line) ( n = 4 mice; one-sample two-tailed t -test, t-statistic = 2.79, p = 0.059). e Same as d , but for walnut ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 14.37, p = 0.001). f Behaviors were decoded above chance (red dotted line) ( n = 4 mice; one-sample two-tailed t -test, cricket t-statistics: approach = 3.87, p = 0.031; eat = 5.59, p = 0.011; walnut t-statistics: approach = 4.75, p = 0.018, eat = 7.53, p = 0.005). g Cells co-registered across assays. h Mahalanobis distance between points from two clusters that display higher overlap (left panel with light and dark blue points) and two clusters that are well-separated (right panel with light and dark green points). i Mahalanobis distance between approach and eating clusters across the cricket and walnut assays in n-dimensions ( n = # of co-registered neurons). The distance between eating clusters across assays is smaller than the distance between approach clusters, indicating the representation of eating is more conserved than food approach (approach sample n = 527 time points, eat sample n = 1958 time points; two-tailed Wilcoxon rank-sum test, z-score = 22.88, p < 0.001). j Same as d , but for co-registered cells, showing conserved representation of behaviors across assays ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 4.22, p = 0.024). k The distance between individual points and cluster center is smaller in the eating cluster than the approach cluster, indicating the representation of eating is more conserved across assays (approach sample n = 1049 time points, eat sample n = 5492 time points; two-tailed Wilcoxon rank-sum two-tailed test, z-score = 10.35, p < 0.001). *** p < 0.001, ** p < 0.01, * p < 0.05, † p = 0.059. Data are presented as mean values +/- SEM. Source data are provided as a Source Data File.
    Matlab Function 'Silhouette, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/silhouette+matlab+function/pmc10920831-532-14-12
    Average 90 stars, based on 1 article reviews
    matlab function 'silhouette - by Bioz Stars, 2026-09
    90/100 stars
    		  Buy from Supplier
    matlab function silhouette  (MathWorks Inc)
    93
    MathWorks Inc matlab function silhouette
    a Surgery for recording l/vlPAG vgat calcium transients (top). Example l/vlPAG vgat traces (bottom). b Order of assays. c L/vlPAG vgat activity centered at eating onset (cricket assay n = 223 neurons; walnut assay n = 204 neurons). d Representation of behaviors in principal component space (PC) during cricket hunting (see example on left). Clustering quality was measured by <t>silhouette</t> score, which was higher than the chance level of zero (dotted red line) ( n = 4 mice; one-sample two-tailed t -test, t-statistic = 2.79, p = 0.059). e Same as d , but for walnut ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 14.37, p = 0.001). f Behaviors were decoded above chance (red dotted line) ( n = 4 mice; one-sample two-tailed t -test, cricket t-statistics: approach = 3.87, p = 0.031; eat = 5.59, p = 0.011; walnut t-statistics: approach = 4.75, p = 0.018, eat = 7.53, p = 0.005). g Cells co-registered across assays. h Mahalanobis distance between points from two clusters that display higher overlap (left panel with light and dark blue points) and two clusters that are well-separated (right panel with light and dark green points). i Mahalanobis distance between approach and eating clusters across the cricket and walnut assays in n-dimensions ( n = # of co-registered neurons). The distance between eating clusters across assays is smaller than the distance between approach clusters, indicating the representation of eating is more conserved than food approach (approach sample n = 527 time points, eat sample n = 1958 time points; two-tailed Wilcoxon rank-sum test, z-score = 22.88, p < 0.001). j Same as d , but for co-registered cells, showing conserved representation of behaviors across assays ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 4.22, p = 0.024). k The distance between individual points and cluster center is smaller in the eating cluster than the approach cluster, indicating the representation of eating is more conserved across assays (approach sample n = 1049 time points, eat sample n = 5492 time points; two-tailed Wilcoxon rank-sum two-tailed test, z-score = 10.35, p < 0.001). *** p < 0.001, ** p < 0.01, * p < 0.05, † p = 0.059. Data are presented as mean values +/- SEM. Source data are provided as a Source Data File.
    Matlab Function Silhouette, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/silhouette+matlab+function/MATLAB+Production+Server+Client+Libraries/pmc08388031-134-2-1
    Average 93 stars, based on 1 article reviews
    matlab function silhouette - by Bioz Stars, 2026-09
    93/100 stars
    		  Buy from Supplier
    silhouette matlab function  (MathWorks Inc)
    90
    MathWorks Inc silhouette matlab function
    a Surgery for recording l/vlPAG vgat calcium transients (top). Example l/vlPAG vgat traces (bottom). b Order of assays. c L/vlPAG vgat activity centered at eating onset (cricket assay n = 223 neurons; walnut assay n = 204 neurons). d Representation of behaviors in principal component space (PC) during cricket hunting (see example on left). Clustering quality was measured by <t>silhouette</t> score, which was higher than the chance level of zero (dotted red line) ( n = 4 mice; one-sample two-tailed t -test, t-statistic = 2.79, p = 0.059). e Same as d , but for walnut ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 14.37, p = 0.001). f Behaviors were decoded above chance (red dotted line) ( n = 4 mice; one-sample two-tailed t -test, cricket t-statistics: approach = 3.87, p = 0.031; eat = 5.59, p = 0.011; walnut t-statistics: approach = 4.75, p = 0.018, eat = 7.53, p = 0.005). g Cells co-registered across assays. h Mahalanobis distance between points from two clusters that display higher overlap (left panel with light and dark blue points) and two clusters that are well-separated (right panel with light and dark green points). i Mahalanobis distance between approach and eating clusters across the cricket and walnut assays in n-dimensions ( n = # of co-registered neurons). The distance between eating clusters across assays is smaller than the distance between approach clusters, indicating the representation of eating is more conserved than food approach (approach sample n = 527 time points, eat sample n = 1958 time points; two-tailed Wilcoxon rank-sum test, z-score = 22.88, p < 0.001). j Same as d , but for co-registered cells, showing conserved representation of behaviors across assays ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 4.22, p = 0.024). k The distance between individual points and cluster center is smaller in the eating cluster than the approach cluster, indicating the representation of eating is more conserved across assays (approach sample n = 1049 time points, eat sample n = 5492 time points; two-tailed Wilcoxon rank-sum two-tailed test, z-score = 10.35, p < 0.001). *** p < 0.001, ** p < 0.01, * p < 0.05, † p = 0.059. Data are presented as mean values +/- SEM. Source data are provided as a Source Data File.
    Silhouette Matlab Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/silhouette+matlab+function/pm30549336-72-7-8
    Average 90 stars, based on 1 article reviews
    silhouette matlab function - by Bioz Stars, 2026-09
    90/100 stars
    		  Buy from Supplier
    silhouette matlab functions  (MathWorks Inc)
    90
    MathWorks Inc silhouette matlab functions
    a Surgery for recording l/vlPAG vgat calcium transients (top). Example l/vlPAG vgat traces (bottom). b Order of assays. c L/vlPAG vgat activity centered at eating onset (cricket assay n = 223 neurons; walnut assay n = 204 neurons). d Representation of behaviors in principal component space (PC) during cricket hunting (see example on left). Clustering quality was measured by <t>silhouette</t> score, which was higher than the chance level of zero (dotted red line) ( n = 4 mice; one-sample two-tailed t -test, t-statistic = 2.79, p = 0.059). e Same as d , but for walnut ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 14.37, p = 0.001). f Behaviors were decoded above chance (red dotted line) ( n = 4 mice; one-sample two-tailed t -test, cricket t-statistics: approach = 3.87, p = 0.031; eat = 5.59, p = 0.011; walnut t-statistics: approach = 4.75, p = 0.018, eat = 7.53, p = 0.005). g Cells co-registered across assays. h Mahalanobis distance between points from two clusters that display higher overlap (left panel with light and dark blue points) and two clusters that are well-separated (right panel with light and dark green points). i Mahalanobis distance between approach and eating clusters across the cricket and walnut assays in n-dimensions ( n = # of co-registered neurons). The distance between eating clusters across assays is smaller than the distance between approach clusters, indicating the representation of eating is more conserved than food approach (approach sample n = 527 time points, eat sample n = 1958 time points; two-tailed Wilcoxon rank-sum test, z-score = 22.88, p < 0.001). j Same as d , but for co-registered cells, showing conserved representation of behaviors across assays ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 4.22, p = 0.024). k The distance between individual points and cluster center is smaller in the eating cluster than the approach cluster, indicating the representation of eating is more conserved across assays (approach sample n = 1049 time points, eat sample n = 5492 time points; two-tailed Wilcoxon rank-sum two-tailed test, z-score = 10.35, p < 0.001). *** p < 0.001, ** p < 0.01, * p < 0.05, † p = 0.059. Data are presented as mean values +/- SEM. Source data are provided as a Source Data File.
    Silhouette Matlab Functions, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/silhouette+matlab+function/pmc06596702-169-19-21
    Average 90 stars, based on 1 article reviews
    silhouette matlab functions - by Bioz Stars, 2026-09
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    a Surgery for recording l/vlPAG vgat calcium transients (top). Example l/vlPAG vgat traces (bottom). b Order of assays. c L/vlPAG vgat activity centered at eating onset (cricket assay n = 223 neurons; walnut assay n = 204 neurons). d Representation of behaviors in principal component space (PC) during cricket hunting (see example on left). Clustering quality was measured by silhouette score, which was higher than the chance level of zero (dotted red line) ( n = 4 mice; one-sample two-tailed t -test, t-statistic = 2.79, p = 0.059). e Same as d , but for walnut ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 14.37, p = 0.001). f Behaviors were decoded above chance (red dotted line) ( n = 4 mice; one-sample two-tailed t -test, cricket t-statistics: approach = 3.87, p = 0.031; eat = 5.59, p = 0.011; walnut t-statistics: approach = 4.75, p = 0.018, eat = 7.53, p = 0.005). g Cells co-registered across assays. h Mahalanobis distance between points from two clusters that display higher overlap (left panel with light and dark blue points) and two clusters that are well-separated (right panel with light and dark green points). i Mahalanobis distance between approach and eating clusters across the cricket and walnut assays in n-dimensions ( n = # of co-registered neurons). The distance between eating clusters across assays is smaller than the distance between approach clusters, indicating the representation of eating is more conserved than food approach (approach sample n = 527 time points, eat sample n = 1958 time points; two-tailed Wilcoxon rank-sum test, z-score = 22.88, p < 0.001). j Same as d , but for co-registered cells, showing conserved representation of behaviors across assays ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 4.22, p = 0.024). k The distance between individual points and cluster center is smaller in the eating cluster than the approach cluster, indicating the representation of eating is more conserved across assays (approach sample n = 1049 time points, eat sample n = 5492 time points; two-tailed Wilcoxon rank-sum two-tailed test, z-score = 10.35, p < 0.001). *** p < 0.001, ** p < 0.01, * p < 0.05, † p = 0.059. Data are presented as mean values +/- SEM. Source data are provided as a Source Data File.

    Journal: Nature Communications

    Article Title: Control of feeding by a bottom-up midbrain-subthalamic pathway

    doi: 10.1038/s41467-024-46430-5

    Figure Lengend Snippet: a Surgery for recording l/vlPAG vgat calcium transients (top). Example l/vlPAG vgat traces (bottom). b Order of assays. c L/vlPAG vgat activity centered at eating onset (cricket assay n = 223 neurons; walnut assay n = 204 neurons). d Representation of behaviors in principal component space (PC) during cricket hunting (see example on left). Clustering quality was measured by silhouette score, which was higher than the chance level of zero (dotted red line) ( n = 4 mice; one-sample two-tailed t -test, t-statistic = 2.79, p = 0.059). e Same as d , but for walnut ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 14.37, p = 0.001). f Behaviors were decoded above chance (red dotted line) ( n = 4 mice; one-sample two-tailed t -test, cricket t-statistics: approach = 3.87, p = 0.031; eat = 5.59, p = 0.011; walnut t-statistics: approach = 4.75, p = 0.018, eat = 7.53, p = 0.005). g Cells co-registered across assays. h Mahalanobis distance between points from two clusters that display higher overlap (left panel with light and dark blue points) and two clusters that are well-separated (right panel with light and dark green points). i Mahalanobis distance between approach and eating clusters across the cricket and walnut assays in n-dimensions ( n = # of co-registered neurons). The distance between eating clusters across assays is smaller than the distance between approach clusters, indicating the representation of eating is more conserved than food approach (approach sample n = 527 time points, eat sample n = 1958 time points; two-tailed Wilcoxon rank-sum test, z-score = 22.88, p < 0.001). j Same as d , but for co-registered cells, showing conserved representation of behaviors across assays ( n = 4 mice; one-one-sample two-tailed t -test, t-statistic = 4.22, p = 0.024). k The distance between individual points and cluster center is smaller in the eating cluster than the approach cluster, indicating the representation of eating is more conserved across assays (approach sample n = 1049 time points, eat sample n = 5492 time points; two-tailed Wilcoxon rank-sum two-tailed test, z-score = 10.35, p < 0.001). *** p < 0.001, ** p < 0.01, * p < 0.05, † p = 0.059. Data are presented as mean values +/- SEM. Source data are provided as a Source Data File.

    Article Snippet: The silhouette score was calculated across these three behavioral clusters using the Matlab function ‘silhouette’.

    Techniques: Activity Assay, Two Tailed Test